maq/maq.spec
Name: maq
Summary: Mapping and Assembly with Qualities
Version: 0.7.1
Release: 1
License: GPL
Group: Applications/Engineering
URL: http://maq.sourceforge.net/
Description: Maq is a software that builds mapping assemblies from short reads generated by
the next-generation sequencing machines. It is particularly designed for
Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to
handle AB SOLiD data.
CentOS 7 x86_64
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CentOS 6 x86_64
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Contents
The spec file used by the build system currently has the following contents:
# $Id$
# Authority: shuff
# Upstream: Heng Li <maq-help$lists,sourceforge,net>
Summary: Mapping and Assembly with Qualities
Name: maq
Version: 0.7.1
Release: 1%{?dist}
License: GPL
Group: Applications/Engineering
URL: http://maq.sourceforge.net/
Source: http://downloads.sourceforge.net/project/maq/maq/%{version}/maq-%{version}.tar.bz2
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root
BuildRequires: binutils, gcc-c++, make, autoconf, automake
BuildRequires: glibc-devel
BuildRequires: zlib-devel
Requires: gnuplot
Obsoletes: mapass2
%description
Maq is a software that builds mapping assemblies from short reads generated by
the next-generation sequencing machines. It is particularly designed for
Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to
handle AB SOLiD data.
%prep
%setup
%build
CFLAGS="%{optflags}" %configure --enable-slowmap
%{__make} %{?_smp_mflags}
%install
%{__rm} -rf %{buildroot}
%{__make} install DESTDIR=%{buildroot}
%clean
%{__rm} -rf %{buildroot}
%files
%defattr(-, root, root, 0755)
%doc AUTHORS COPYING ChangeLog FUTURES INSTALL NEWS PROBLEMS README
%{_bindir}/*
%changelog
* Tue Jun 15 2010 Steve Huff <shuff@vecna.org> - 0.7.1-1
- Initial package.